Blackberry Cheesecake Muffins Recipe
If there’s ever been a way to capture the magic of summer mornings and put it in your hand, these Blackberry Cheesecake Muffins are exactly that! Each bite blends juicy, tart blackberries with a creamy, decadent cheesecake filling, all wrapped up in a tender muffin crumb. Whether you’re serving them for brunch, a sweet snack, or an after-dinner treat, this irresistible duo promises a flavor adventure: soft, fluffy, tangy, and just the right touch of sweetness. Get ready to fall in love, because Blackberry Cheesecake Muffins have a way of bringing smiles to any table!

Ingredients You’ll Need
The beauty of Blackberry Cheesecake Muffins comes from the simple, familiar ingredients that work together to create something truly special. Each component plays its part, from adding moisture and richness to building those gorgeous pops of berry color.
- All-Purpose Flour: Forms the tender structure of your muffins, ensuring they hold up to the creamy center and juicy berries.
- Baking Powder: Gives your muffins that lovely rise and light texture.
- Baking Soda: Works alongside the baking powder for an extra lift and softness.
- Salt: Just a pinch balances the sweetness and keeps flavors vibrant.
- Unsalted Butter (melted and cooled): Adds rich, buttery flavor and keeps the crumb moist.
- Granulated Sugar: Sweetens both the muffin batter and cheesecake filling perfectly.
- Brown Sugar: Adds a hint of caramel warmth to boost depth of flavor.
- Large Eggs: Bind everything together and add a bit of lift.
- Sour Cream: Creates tender, fluffy muffins with a subtle tang—secret weapon for bakery-style muffins!
- Milk: Helps blend the batter smoothly and creates the perfect consistency.
- Vanilla Extract: Infuses both the batter and cheesecake center with cozy aroma.
- Fresh or Frozen Blackberries: These juicy gems are the star; halve if large and don’t thaw if frozen to avoid extra moisture.
- Cream Cheese (softened): The heart of your cheesecake filling, making every muffin bite dreamy.
How to Make Blackberry Cheesecake Muffins
Step 1: Prepare Your Muffin Tin and Filling
Heat your oven to 375°F (190°C) and line a 12-cup muffin pan with paper liners—for easy release and less cleanup. In a small bowl, blend the softened cream cheese, 3 tablespoons sugar, and 1 teaspoon vanilla until totally smooth. This creamy mixture will become those luscious cheesecake pockets inside every muffin. Set it aside for later.
Step 2: Mix Dry Ingredients
Whisk together the flour, baking powder, baking soda, and salt in a large bowl. This step ensures each leavening agent is evenly distributed, so your muffins bake up fluffy, not dense. Plus, whisking first means you won’t risk overmixing later!
Step 3: Blend Wet Ingredients
In a medium bowl, thoroughly mix the melted butter, granulated sugar, brown sugar, eggs, sour cream, milk, and another splash of vanilla extract. The result? A rich, well-combined base that brings moisture and flavor to the party.
Step 4: Combine to Make Muffin Batter
Pour your wet ingredients into your bowl of dry ingredients. With a spatula or spoon, gently stir just until no dry streaks remain. Be careful not to overmix—this is how you keep your Blackberry Cheesecake Muffins soft and tender. Then, gently fold in the blackberries. If any are particularly large, halve them before adding.
Step 5: Layer Batter and Cheesecake Filling
Fill each muffin liner halfway with batter. Now, spoon about 1 teaspoon of your cheesecake filling right in the center of each. Top with more muffin batter until each cup is about three-quarters full. For a fun twist, you can gently swirl the cheesecake layer into the muffin batter using a toothpick for a marbled look!
Step 6: Bake and Cool
Bake for 18 to 22 minutes until the muffin tops are golden and a toothpick inserted into the side (not the creamy cheesecake middle) comes out mostly clean. Let the muffins cool in the pan for about 5 minutes to set their shape, then move them to a wire rack to finish cooling completely. Try to resist diving in immediately, as the cheesecake centers need time to set!
How to Serve Blackberry Cheesecake Muffins

Garnishes
A light dusting of powdered sugar adds a pretty finish, or sprinkle on a few extra fresh blackberry halves just before serving. If you want to make these muffins brunch-worthy, a tiny dollop of whipped cream or a mint sprig looks gorgeous and gives a hint of elegance.
Side Dishes
Pair your Blackberry Cheesecake Muffins with a side of Greek yogurt, honey, and a handful of granola for a balanced breakfast. They’re fantastic next to fresh fruit or a light green salad if serving for brunch. And, of course, a hot espresso or chilled iced coffee always makes them shine.
Creative Ways to Present
Stack them high on a vintage cake stand or place them in a lined basket for a warm, bakery-style feel. You can even wrap each muffin in parchment and tie with kitchen twine for a sweet gift. For festive gatherings, arrange them in a circle on a platter, filling the center with extra fresh berries.
Make Ahead and Storage
Storing Leftovers
Blackberry Cheesecake Muffins keep well in the refrigerator for up to 3 days. Store them in an airtight container to keep their texture soft and the cheesecake centers fresh. They’re wonderful chilled and make for a perfect grab-and-go breakfast or snack.
Freezing
These muffins are freezer-friendly! After cooling completely, arrange them in a single layer on a baking sheet and freeze until solid. Once firm, transfer to a freezer-safe bag or container and keep for up to 2 months. Thaw overnight in the fridge or gently at room temperature.
Reheating
To refresh that “just-baked” flavor, warm your Blackberry Cheesecake Muffins in the microwave for 10 to 15 seconds, or in a preheated 300°F oven for 5 to 8 minutes. This brings back their soft crumb and gooey cheesecake heart without drying them out.
FAQs
Can I use frozen blackberries instead of fresh?
Absolutely! Frozen blackberries work beautifully—just add them straight from the freezer. Don’t thaw first, as this will release excess moisture and might make your muffins a bit soggy.
Why does my cheesecake filling sink?
Sinking usually happens if the batter is too thin or if the filling is too heavy. Make sure your muffin batter is thick and don’t overmix. Also, avoid overfilling with cheesecake filling; a teaspoon is the sweet spot!
Can I substitute the sour cream with yogurt?
Yes, full-fat plain Greek yogurt is an excellent swap for sour cream. It offers the same moisture and tangy kick, so your Blackberry Cheesecake Muffins stay fluffy and tender.
How do I make the muffins look bakery-style?
For that bakery touch, pop a few extra blackberry pieces on top of the muffins just before baking, and use a large ice cream scoop to evenly fill your muffin cups. This helps each muffin rise tall and look inviting.
Can I make mini muffins with this recipe?
You sure can! Scoop the batter and filling into a greased or lined mini muffin pan (it should yield about 24 minis). Just reduce baking time to 10–12 minutes and keep a close eye on them, since the centers will bake more quickly.
Final Thoughts
There’s a simple joy in baking and sharing a batch of Blackberry Cheesecake Muffins. Their blend of tangy, creamy, and fruity flavors is a treat that never fails to impress. I hope you give this recipe a go and make it part of your own kitchen traditions—your friends and family will thank you!
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Blackberry Cheesecake Muffins Recipe
- Total Time: 35 minutes
- Yield: 12 muffins 1x
- Diet: Vegetarian
Description
Indulge in these delightful Blackberry Cheesecake Muffins that offer a perfect balance of sweet, tangy blackberries and creamy cheesecake filling nestled in a moist muffin.
Ingredients
Dry Ingredients:
- 1 3/4 cups all-purpose flour
- 2 teaspoons baking powder
- 1/2 teaspoon baking soda
- 1/4 teaspoon salt
Wet Ingredients:
- 1/2 cup unsalted butter (melted and cooled)
- 1/2 cup granulated sugar
- 1/4 cup brown sugar
- 2 large eggs
- 1/2 cup sour cream
- 1/4 cup milk
- 1 teaspoon vanilla extract
Cheesecake Filling:
- 6 ounces cream cheese (softened)
- 3 tablespoons granulated sugar
- 1 teaspoon vanilla extract
Additional:
- 1 cup fresh or frozen blackberries (halved if large)
Instructions
- Preheat the oven to 375°F (190°C) and line a muffin tin with paper liners.
- Prepare Cheesecake Filling: Mix cream cheese, sugar, and vanilla until smooth.
- Prepare Muffin Batter: Whisk dry ingredients. In a separate bowl, mix wet ingredients, then combine with dry. Fold in blackberries.
- Fill Muffin Cups: Fill halfway with batter, add cheesecake filling, top with more batter.
- Bake: Bake for 18–22 minutes until golden and a toothpick comes out clean.
- Cool and Serve: Cool in pan for 5 minutes, then transfer to a wire rack to cool.
Notes
- Use fresh blackberries for best texture.
- If using frozen, do not thaw before adding.
- Swirl the cheesecake filling for a marbled effect.
- Store leftovers in the fridge for up to 3 days.
- Prep Time: 15 minutes
- Cook Time: 20 minutes
- Category: Breakfast
- Method: Baking
- Cuisine: American
Nutrition
- Serving Size: 1 muffin
- Calories: 250
- Sugar: 16g
- Sodium: 180mg
- Fat: 12g
- Saturated Fat: 7g
- Unsaturated Fat: 4g
- Trans Fat: 0g
- Carbohydrates: 30g
- Fiber: 1g
- Protein: 4g
- Cholesterol: 55mg